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[[Category:Main Page]]
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<div style="float:left; margin: 0px 20px 0px 0px">__TOC__</div>
[[File:LogoProbitas.png|right|thumb|250px|link=https://www.fundacionprobitas.org|Probitas Foundation]]


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[[File:Imaging-overview.png|500px|right|thumb|Imaging Overview]]
ARIS is a laboratory software system for patient management, analysis and laboratory tests. It offers basic functionalities and a simple interface that can be flexibly configured to support the main tasks of a laboratory. ARIS has been designed specifically by [https://www.fundacionprobitas.org Probitas Foundation] and it is available to laboratories free of charge.


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<p style="font-size:24px;"><strong>For an improvement of Health through rapid, reliable and economic diagnosis (iH-rred)</strong></p>
These pages contain all the useful information for both final users as well as administrators.


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==Installation and Upgrades== <!--T:14-->
The [[Global Laboratory Initiative]] (GLI) is a program set up by the [https://www.fundacionprobitas.org/en/home Probitas Foundation] in 2010 with the aim of reinforcing the capacities of clinical diagnostic laboratories in the most vulnerable regions of the world.
[[File:Main page.PNG|right|thumb|Main page of the software]]
As part of this big initiative Probitas promoted an [https://imaging.upc.edu/en initiative to create a platform to automate the diagnosis of Malaria and Neglected tropical diseases (NTDs)]. This pages contain information describing different hardware and software technologies involved in this project.


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__TOC__
First of all, the application needs to be installed in a regular computer. It will automatically install some required software platforms. The [[Installation and Upgrades|Installation and Upgrades]] page contains all the details and step by step instructions to do it. If an Internet connection is at hand, it can also be upgraded when a new version is available, as explained in the same page.


== <span id="ARIS"></span>Analytical requests information system (ARIS) == <!--T:5-->
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[[ARIS:main|ARIS]] is a laboratory software system for managing and analyzing data related to patients, requests, diagnostics, and analytical tests.
The application has been developed with native support in English and Spanish, however, it supports multilanguage. The [[Define new language|Define new language]] page explains how to extend it to other languages.
It offers basic functionalities and a simple interface that can be flexibly configured to support the main tasks of a small laboratory.


== Autofocus microscope == <!--T:6-->
==User Guide== <!--T:17-->
[[Images:Microscope|Autofocus microscope]] is a set of hardware pieces connected to an Arduino engine that automate the image capture from samples.
A mobile phone controls the movement of the plaque, and eventually get the images of the sample.


=== Mobile App === <!--T:7-->
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The [[Images:Mobile App|Mobile App]] is an open source software application to control the Arduino engines that move the plaque and focus the ocular of the microscope, as well as automatically take pictures of the sample.
The [[User Guide|User Guide]] page contains all the information necessary for both final users as well as administrators. It explains all functionalities provided by the application.
Eventually, the images taken with the app can be downloaded to the desktop application [[ARIS:main|ARIS]].


== Annotation App == <!--T:8-->
==Backup and Restore== <!--T:19-->
The [[Annotation App:Main|Annotation App]] is a software tool facilitating the annotation of images to create training datasets.
Given an image of a sample, it allows to frame an object and indicate whether it is leucocyte, parasite, etc.
Eventually, once we have enough tagged images, these are used to train a Neural Network that can automate the process with high precision.
 
== Annotated images Data Lake == <!--T:9-->
The [[Images:Data Lake|Data Lake]] is a repository of images with their corresponding annotations.
This include the management software, as well as the necessary tools to extract some basic statistics and easily download subsets of images that can be used as a training set for Machine Learning.


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As for any other information system, it is important to extract a copy of the database regularly, and move it to another support for safety reasons. The [[Backup and Restore|Backup and Restore]] page explains how such copy can be generated and accessed, as well as used to recover all the data in the unlikely case of database corruption.
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Latest revision as of 10:35, 1 February 2024

Other languages:
Probitas Foundation

ARIS is a laboratory software system for patient management, analysis and laboratory tests. It offers basic functionalities and a simple interface that can be flexibly configured to support the main tasks of a laboratory. ARIS has been designed specifically by Probitas Foundation and it is available to laboratories free of charge.

These pages contain all the useful information for both final users as well as administrators.

Installation and Upgrades[edit]

Main page of the software

First of all, the application needs to be installed in a regular computer. It will automatically install some required software platforms. The Installation and Upgrades page contains all the details and step by step instructions to do it. If an Internet connection is at hand, it can also be upgraded when a new version is available, as explained in the same page.

The application has been developed with native support in English and Spanish, however, it supports multilanguage. The Define new language page explains how to extend it to other languages.

User Guide[edit]

The User Guide page contains all the information necessary for both final users as well as administrators. It explains all functionalities provided by the application.

Backup and Restore[edit]

As for any other information system, it is important to extract a copy of the database regularly, and move it to another support for safety reasons. The Backup and Restore page explains how such copy can be generated and accessed, as well as used to recover all the data in the unlikely case of database corruption.

Analytical Requests Information System

Retrieved from "https://dl-prod.essi.upc.edu/ARIS/index.php?title=Main_Page&oldid=2406"